Acta Horticulturae Sinica ›› 2021, Vol. 48 ›› Issue (8): 1470-1484.doi: 10.16420/j.issn.0513-353x.2020-0477
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HONG Yanhong, YE Qinghua, LI Zekun, WANG Wei, XIE Qian, CHEN Qingxi(), CHEN Jianqing()
Received:
2021-01-22
Revised:
2021-02-22
Online:
2021-08-25
Published:
2021-09-06
Contact:
CHEN Qingxi,CHEN Jianqing
E-mail:cqx0246@fafu.edu.cn;jianqingchen@fafu.edu.cn
CLC Number:
HONG Yanhong, YE Qinghua, LI Zekun, WANG Wei, XIE Qian, CHEN Qingxi, CHEN Jianqing. Accumulation of Anthocyanins in Red-flowered Strawberry‘Meihong’Petals and Expression Analysis of MYB Gene[J]. Acta Horticulturae Sinica, 2021, 48(8): 1470-1484.
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URL: https://www.ahs.ac.cn/EN/10.16420/j.issn.0513-353x.2020-0477
基因名称 Gene Name | 基因ID Gene ID | 引物序列(5′-3′) Primer sequences |
---|---|---|
FaMYB82 | maker-Fvb6-4-augustus-gene-249.24 | F:ATCGTTAGAGGCAACATTACCG |
R:TCGCAGCTTCCTCTTTACGAA | ||
FaMYB6 | maker-Fvb5-1-augustus-gene-245.45 | F:AGACCAACGCCTCATCGACT |
R:CTCCCCGCAATCAAAGACCAC | ||
FaMYB90 | maker-Fvb6-3-snap-gene-424.65 | F:AACTACCTTCGGCCAAACATC |
R:TCCAGTAGTTCTTCACATCATTACC | ||
FaPAL | maker-Fvb6-2-augustus-gene-174.36 | F:CGCCCCAATTCTAAGTCCGTT |
R:CAGAGCCAACAGCAGTACCAT | ||
Fa4CL-1 | maker-Fvb5-2-snap-gene-144.44 | F:AGTTCAGACCCTTCCTCATGT |
R:CTAGCTGGAGGCAAAAAGGAT | ||
Fa4CL-2 | maker-Fvb5-3-augustus-gene-134.28 | F:GCTGTGTTGATTTCGCATCCT |
R:GCTTCCTAACCACAAATGCCACT | ||
FaF3H-1 | maker-Fvb1-3-augustus-gene-64.31 | F:CATCCACCCCAAGCTCAT |
R:CAATCCTGCACTGCCTCT | ||
FaF3H-2 | maker-Fvb1-4-augustus-gene-56.40 | F:GCATCGACCCCAAGCTCAT |
R:CCAATCCTGCACCGCTTCT | ||
FaDFR | maker-Fvb2-4-snap-gene-258.87 | F:CACGCCTATGGATTTCGAGT |
R:AGACCTCCTTTCGATGCTCT | ||
FaANS | maker-Fvb5-3-augustus-gene-266.54 | F:TCATGCACATAGGCGACACC |
R:CAGAAAACCGCCCACGAGAT | ||
Fa3GT | maker-Fvb7-1-augustus-gene-319.41 | F:CGCTCTTTTCACGTATGCTT |
R:CTTGCTGGTGGTTCTAGTAGGT | ||
Fa3,5GT | maker-Fvb7-2-snap-gene-316.69 | F:CCACACCTCCGATCTTCACC |
R:CGTACCACCCACAAGAACCT | ||
FaUBC10 (内参Reference gene) | maker-Fvb5-2-augustus-gene-25.49 | F:TGCCCTGACCATATCGAAGG |
R:CTTGCGGTGGTCTCATACTT |
Table 1 Primer sequences
基因名称 Gene Name | 基因ID Gene ID | 引物序列(5′-3′) Primer sequences |
---|---|---|
FaMYB82 | maker-Fvb6-4-augustus-gene-249.24 | F:ATCGTTAGAGGCAACATTACCG |
R:TCGCAGCTTCCTCTTTACGAA | ||
FaMYB6 | maker-Fvb5-1-augustus-gene-245.45 | F:AGACCAACGCCTCATCGACT |
R:CTCCCCGCAATCAAAGACCAC | ||
FaMYB90 | maker-Fvb6-3-snap-gene-424.65 | F:AACTACCTTCGGCCAAACATC |
R:TCCAGTAGTTCTTCACATCATTACC | ||
FaPAL | maker-Fvb6-2-augustus-gene-174.36 | F:CGCCCCAATTCTAAGTCCGTT |
R:CAGAGCCAACAGCAGTACCAT | ||
Fa4CL-1 | maker-Fvb5-2-snap-gene-144.44 | F:AGTTCAGACCCTTCCTCATGT |
R:CTAGCTGGAGGCAAAAAGGAT | ||
Fa4CL-2 | maker-Fvb5-3-augustus-gene-134.28 | F:GCTGTGTTGATTTCGCATCCT |
R:GCTTCCTAACCACAAATGCCACT | ||
FaF3H-1 | maker-Fvb1-3-augustus-gene-64.31 | F:CATCCACCCCAAGCTCAT |
R:CAATCCTGCACTGCCTCT | ||
FaF3H-2 | maker-Fvb1-4-augustus-gene-56.40 | F:GCATCGACCCCAAGCTCAT |
R:CCAATCCTGCACCGCTTCT | ||
FaDFR | maker-Fvb2-4-snap-gene-258.87 | F:CACGCCTATGGATTTCGAGT |
R:AGACCTCCTTTCGATGCTCT | ||
FaANS | maker-Fvb5-3-augustus-gene-266.54 | F:TCATGCACATAGGCGACACC |
R:CAGAAAACCGCCCACGAGAT | ||
Fa3GT | maker-Fvb7-1-augustus-gene-319.41 | F:CGCTCTTTTCACGTATGCTT |
R:CTTGCTGGTGGTTCTAGTAGGT | ||
Fa3,5GT | maker-Fvb7-2-snap-gene-316.69 | F:CCACACCTCCGATCTTCACC |
R:CGTACCACCCACAAGAACCT | ||
FaUBC10 (内参Reference gene) | maker-Fvb5-2-augustus-gene-25.49 | F:TGCCCTGACCATATCGAAGG |
R:CTTGCGGTGGTCTCATACTT |
Fig. 2 Total anthocyanin content in petals of red-flowered strawberry‘Meihong’and white-flowered strawberry‘Monterey’at different developmental stages P ≤ 0.01.
Fig. 5 Expression analysis of differential R2R3-MYB genes(A,FPKM > 10,standardized by Z-score)and Pearson correlation analysis between differential R2R3-MYB genes and anthocyanin content(B)in‘Meihong’strawberry petals
Fig. 6 Phylogenetic tree and conserved motif analysis of R2R3-MYB transcription factor The branch values were self-guided values of Bootstrap test for 1 000 times by neighbor-joining method.
Fig. 7 Relative expression levels of nine differential structural genes and three R2R3-MYB genes related to anthocyanin synthesis The lowest expression level of the data(the expression level of Fa3GT in S1 period)was used as the reference data to calculate the relative amount of data.
基因名称 Gene name | Pearson系数(r) | ||||||||
---|---|---|---|---|---|---|---|---|---|
FaPAL | Fa4CL-1 | Fa4CL-2 | FaF3H-1 | FaF3H-2 | FaDFR | FaANS | Fa3GT | Fa35GT | |
FaMYB82 | -0.90 | -0.93 | -0.87 | -0.28 | -0.32 | -0.88 | -0.70 | -0.85 | 0.81 |
FaMYB6 | 0.61 | 0.54 | 0.58 | -0.27 | -0.20 | 0.62 | 0.30 | 0.56 | -0.86 |
FaMYB90 | 0.92 | 0.87 | 0.95 | 0.31 | 0.33 | 0.94 | 0.70 | 0.90 | -0.79 |
Table 2 Pearson correlation analysis between three R2R3-MYB genes and nine structural genes
基因名称 Gene name | Pearson系数(r) | ||||||||
---|---|---|---|---|---|---|---|---|---|
FaPAL | Fa4CL-1 | Fa4CL-2 | FaF3H-1 | FaF3H-2 | FaDFR | FaANS | Fa3GT | Fa35GT | |
FaMYB82 | -0.90 | -0.93 | -0.87 | -0.28 | -0.32 | -0.88 | -0.70 | -0.85 | 0.81 |
FaMYB6 | 0.61 | 0.54 | 0.58 | -0.27 | -0.20 | 0.62 | 0.30 | 0.56 | -0.86 |
FaMYB90 | 0.92 | 0.87 | 0.95 | 0.31 | 0.33 | 0.94 | 0.70 | 0.90 | -0.79 |
Fig. 9 Relative expression levels of nine structural genes and three R2R3-MYB genes related to anthocyanin synthesis in white-flowered strawberry‘Monterey’ The lowest expression level of the data(Fa3GT in S1 period)was used as the reference data to calculate the relative amount of data.
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