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园艺学报 ›› 2006, Vol. 33 ›› Issue (3): 561-565.

• 研究论文 • 上一篇    下一篇

青花菜快速碱化因子RAL F 的克隆与序列分析

张国裕1, 2;康俊根2;张延国2;娄 平2;  程智慧1  王晓武23

  

  1. (1 西北农林科技大学园艺学院, 陕西杨凌712100; 2 中国农业科学院蔬菜花卉研究所, 北京100081)
  • 收稿日期:2005-08-05 修回日期:2006-02-18 出版日期:2006-06-25 发布日期:2006-06-25

Cloning and Sequence Analyzing of a Gene ( RAL F ) from Broccoli

Zhang Guoyu1, 2;Kang Jungen2;Zhang Yanguo2; Lou Ping2;Cheng Zhihui1;Wang Xiaowu2*   

  1. ( 1College of Horticulture, Northwest A & F University, Yangling, Shananxi 712100, China; 2 Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China)
  • Received:2005-08-05 Revised:2006-02-18 Online:2006-06-25 Published:2006-06-25

摘要: 以一个与甘蓝显性核不育相关的差异表达片段序列为信息探针, 在NCBI与TAIR网站数据库中进行同源EST序列搜索, 经人工拼接、RT - PCR克隆与序列分析验证, 获得了青花菜快速碱化因子RALF(Rapid Alkalinization Factors) 基因的cDNA全长序列, 命名为BoRALFL1 (GenBank序列登录号DQ059310)。该cDNA全长240 bp, 编码79个氨基酸, 与电子克隆获得的序列完全相同。序列分析表明, 编码蛋白存在前导信号肽与多个磷酸化位点, 与同源基因RALFL8核酸序列在88 bp上有82%的一致性, 推导的氨基酸序列在74个氨基酸上存在56%的一致性, 不同植物间氨基酸序列N - 端差异大, C - 端具有较高的保守性。

关键词: 青花菜, 快速碱化因子(RALF), 基因克隆, RT-PCR

Abstract: A differential TDF ( Transcrip t Derived Fragments) in a cDNA-AFLP analysis of buds from male sterile and fertile lines of cabbage was used as a querying probe to blast the GenBank ( http: / /www.ncbi.nlm.nih.gov/BLAST) and Arabidopsis ( http: / /www.arabidopsis.org/BlAST) database. Based on the assembled homologous cDNA sequences, a 490 bp cDNA was amplified and cloned by RT - PCR. Homologous analysis shows that the amplified cDNA has 82% identity on the nucleotide acid sequence, and 56% identity on the amino acids peptide with Arabidopsis gene RALFL8. We designated the gene as BoRALFL1(GenBank accession number DQ059310). We predicted a 240 bp ORF in BoRALFL1 and a 79 amino acids peptide was coded by this cDNA. Further analysis shows that the pepetide is possibly a preprotein with a signal
pepetide and multi-phosphorylation sites, and the C-terminal amino acids of the pepetide are highly conserved among different plant species.

Key words: Broccoli, Brassica oleracea L. var. italica Plancn, RALF, Gene cloning, RT - PCR