https://www.ahs.ac.cn/images/0513-353X/images/top-banner1.jpg|#|苹果
https://www.ahs.ac.cn/images/0513-353X/images/top-banner2.jpg|#|甘蓝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner3.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner4.jpg|#|灵芝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner5.jpg|#|桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner6.jpg|#|黄瓜
https://www.ahs.ac.cn/images/0513-353X/images/top-banner7.jpg|#|蝴蝶兰
https://www.ahs.ac.cn/images/0513-353X/images/top-banner8.jpg|#|樱桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner9.jpg|#|观赏荷花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner10.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner11.jpg|#|月季
https://www.ahs.ac.cn/images/0513-353X/images/top-banner12.jpg|#|菊花

园艺学报 ›› 2017, Vol. 44 ›› Issue (11): 2041-2054.doi: 10.16420/j.issn.0513-353x.2017-0219

• 研究论文 •    下一篇

苹果全基因组PIN 成员鉴定及MdPIN15 的克隆和在腋芽萌发中的表达分析

刘小杰,樊 胜,李国防,檀 鸣,默 宁,马娟娟,张 东,韩明玉*   

  1. 西北农林科技大学园艺学院,陕西杨凌 712100
  • 出版日期:2017-11-25 发布日期:2017-11-25

Genome-wide Identification of PIN Gene Family,Cloning and Expression Analysis of MdPIN15 During Axillary Bud Burst in Malus

LIU Xiaojie,FAN Sheng,LI Guofang,TAN Ming,MO Ning,MA Juanjuan,ZHANG Dong,and HAN Mingyu*   

  1. College of Horticulture,Northwest A & F University,Yangling,Shaanxi 712100,China
  • Online:2017-11-25 Published:2017-11-25

摘要:

从苹果金冠基因组中鉴定得到18 个生长素输出载体蛋白PIN-formed(PIN),对其进行理化
特性、基因结构、系统进化和启动子元件分析。结果表明,MdPIN 基因家族中,含有1 ~ 14 个外显子,
0 ~ 13 个内含子;MdPIN 蛋白的保守基序数量在3 ~ 10。苹果PIN 和拟南芥PIN 等蛋白高度同源,且根
据其进化树分为G1、G2 和G3 亚组;18 个MdPIN 在不同基因型苹果的不同器官中表达具有明显差异。
以‘长富2 号’为材料,从其腋芽中克隆得到一个候选基因MdPIN15,其开放阅读框为1 869 bp,编码
622 个氨基酸。实时定量PCR 表明,MdPIN15 在梢尖部位表达量最高,其次是腋芽,在花芽中表达量最
低;,外源GR24 和Lovastatin(LVS)处理降低MdPIN15 的表达量;6-BA 和去茎尖处理提高了MdPIN15
的表达量。MdPIN15 在介导细胞分裂素(CK)、生长素(IAA)和独脚金内酯(SL)等激素调控腋芽萌
发有重要作用。

关键词: 苹果, PIN, 腋芽萌发, 生物信息学, 基因表达

Abstract:

A total of 18 Auxin efflux carrier protein PIN were identified from the apple genome. We
further systematically analyzed its physical and chemical characteristics,gene structures,evolutionary
relationships and promoter elements. Results showed that the MdPIN gene family contained 1–14 exons
and 0–13 introns;3–10 conserved motifs existed in the MdPIN proteins;MdPIN and AtPIN proteins
were highly homologous and they could be classified into G1,G2 and G3 according to its homology.
Tissue-specific expressions indicated that 18 MdPIN genes had significantly different expression patterns
in different organs or tissues of different genotypes. A candidate gene MdPIN15 was separated and cloned
from axillary bud of Nagafu 2. The open reading frame was 1 869 bp,and it encoded 622 amino acids. Real-time quantitative PCR showed that the the highest transcription level of MdPIN15 was found in the
shoot tips,the second in the axillary buds,and the lowest in the flower buds. Exogenous GR24 and
Lovastatin(LVS)treatments reduced MdPIN15 expression,while it was increased by exogenous 6-BA and
decapitation treatments. It seems to be possible that MdPIN15 could play a vital role in the axillary bud
burst mediated by cytokinin(CK),indole-3-acetic acid(IAA)and strigolactone(SL).

Key words: appple, PIN, buds burst, bioinformatic, gene expression

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