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园艺学报 ›› 2016, Vol. 43 ›› Issue (2): 337-346.doi: 10.16420/j.issn.0513-353x.2015-0331

• 研究报告 • 上一篇    下一篇

猕猴桃SRAP-PCR体系的建立及品种资源亲缘关系研究

井赵斌1,3,*,徐 明1,3,雷玉山1,2,3   

  1. 1陕西省农村科技开发中心,西安 710054;2陕西省西安猕猴桃试验站,西安 710054;3 陕西省汉中猕猴桃研究所,陕西汉中 723500
  • 出版日期:2016-02-25 发布日期:2016-02-25
  • 基金资助:
    陕西省科技统筹创新工程计划项目(2015KTZDNY02-03-01,2016YFXX0021);陕西省自然科学基础研究计划项目(2014JM3077);国家国际科技合作专项项目(2015DFA30400)

Construction and Application of SRAP-PCR System to Analyze Genetic Relationship of Actinidia

JING Zhao-bin1,3,*,XU Ming1,3,and LEI Yu-shan1,2,3   

  1. 1Shaanxi Rural Science and Technology Development Center,Xi’an 710054,China;2Xi’an Kiwifruit Experiment Station of Shaanxi Province,Xi’an 710054,China;3Hanzhong Kiwifruit Research Institute of Shaanxi Province,Hanzhong,Shaanxi 723500,China
  • Online:2016-02-25 Published:2016-02-25

摘要: 以猕猴桃属(Actinidia Lindl.)不同种幼嫩叶片为材料,建立了基因组DNA提取的改良SDS法,在此基础上采用正交试验设计和单因素分析相结合的方法,建立了适合猕猴桃SRAP分析的优化体系,即在20 μL总的反应体系中包括:DNA(40 ng ? μL-1)1 μL、Taq DNA酶(5 U ? μL-1)0.2 μL、dNTPs(2.5 mmol ? L-1) 1.4 μL、引物(10 μmol ? L-1)各1.5 μL、Mg2+(25 mmol ? L-1)2.0 μL、10× 缓冲液2.5 μL、ddH2O 9.9 μL。利用该体系对32份猕猴桃品种资源进行遗传多样性和亲缘关系分析,结果表明14条引物共扩增出275个多态性位点,多态性百分率为100%,SRAP可以作为猕猴桃资源亲缘关系研究的有效标记;在遗传相似系数0.73水平处,供试材料可区分为4组,分别是中华猕猴桃、美味猕猴桃、黑蕊猕猴桃和毛花猕猴桃组。聚类结果表明中华猕猴桃与美味猕猴桃有着非常近的亲缘关系,毛花猕猴桃与中华猕猴桃之间的亲缘关系较远,黑蕊猕猴桃与美味猕猴桃之间亲缘关系可能较近。

关键词: 猕猴桃, SRAP标记, 体系建立, 亲缘关系

Abstract: An improved SDS method,suitable for extracting genomic DNA of Actinidia young leaves,was established. Based on this result,an orthogonal design and a factor analysis method were combined to optimize the SRAP-PCR reaction system of Actinidia. The results indicated that the optimum concentrations of each component in the 20 μL reaction system included:DNA(40 ng ? μL-1)1 μL,Taq Polymerase(5 U ? μL-1)0.2 μL,dNTPs(2.5 mmol ? L-1)1.4 μL,primer(10 μmol ? L-1)1.5 μL,Mg2+ (25 mmol ? L-1)2.0 μL,10× Buffer 2.5 μL,ddH2O 9.9 μL. The genetic diversity and relationships of 32 kiwifruit varieties were analyzed based on this PCR reaction system. Fourteen SRAP primer combinationsgenerating a total of 275 bands,and the polymorphic bands were 100% for all primer sets. The results showed that SRAP could be as an efficient technique to assess genetic diversity for Actinidia. The dendrogram showed that all varieties could be divided into four clusters at the similarity level of 0.73,that including A. chinensis,A. deliciosa,A. melanandra,and A. eriantha. The relationship between A. chinensis and A. deliciosa,A. deliciosa and A. melanandra is close,whereas A. chinensis and A. eriantha is distant.

Key words: Actinidia, SRAP marker, system construction, genetic relationship

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