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园艺学报 ›› 2013, Vol. 40 ›› Issue (2): 333-340.

• 研究报告 • 上一篇    下一篇

基于SSR 标记的四川野生中国樱桃遗传多样性和居群遗传结构分析

 陈 娇, 王小蓉, 汤浩茹, 陈 涛, 黄晓姣, 梁勤彪   

  1. 1 四川农业大学园艺学院,四川雅安 625014;2 四川农业大学果蔬研究所,成都 611130
  • 出版日期:2013-02-25 发布日期:2013-02-25

Assessment of Genetic Diversity and Populations Genetic Structure in Wild
Chinese Cherry from Sichuan Province Using SSR Markers

CHEN   Jiao, WANG  Xiao-Rong, TANG  Hao-Ru, CHEN   Tao, HUANG  Xiao-Jiao, LIANG  Qin-Biao   

  1. 1College of Horticulture,Sichuan Agricultural University,Ya’an,Sichuan 625014,China;2Institute of Pomology and
    Olericulture,Sichuan Agricultural University,Chengdu 611130,China
  • Online:2013-02-25 Published:2013-02-25

摘要: 采用SSR 分子标记技术对四川野生中国樱桃5 个居群共133 株的遗传多样性水平及居群的
遗传结构进行了研究。结果显示:10 对SSR 引物共检测到78 个等位基因,平均每位点等位基因7.8 个。
Nei’s 基因多样性指数(H)为0.6112 ~ 0.6689,Shannon’s 信息指数(I)为1.1984 ~ 1.3786。基于分子方
差分析(AMOVA),92.53%的变异来自居群内,7.47%的遗传变异来自于居群间。居群间遗传距离(GD <
0.2416)、遗传一致度(GI > 0.7854)、遗传分化指数(Fst = 0.0844)以及较强的基因流(Nm = 2.7125)均
表明居群间的遗传分化水平较低,居群内存在显著近交现象(Fis = 0.3986),且居群在大多数位点上偏离
Hardy-Weinberg 平衡。基于上述结果,分析讨论了居群较高遗传多样性和居群间较低遗传分化形成的可能
原因,并提出野生中国樱桃的保护利用策略。

关键词: 野生中国樱桃, SSR, 遗传多样性, 遗传结构

Abstract: Genetic diversity and genetic structure of five wild Chinese cherry(Prunus pseudocerasus
Lindl.)populations from Sichuan were investigated using ten SSR markers selected from 31 markers. A
total of 78 alleles were successfully amplified,and the number of alleles per locus ranged from 5 to 10,
with an average of 7.8. The relatively high levels gene diversity(H:0.6112–0.6689)and Shannon’s
diversity(I:1.1984–1.3786)revealed relatively rich genetic diversity in the five wild Chinese cherry
populations. The AMOVA analysis revealed low genetic differentiation among populations,with only
7.47% of total variability partitioned among populations(P < 0.001). This consisted with genetic distance
(GD < 0.2416),genetic identity(GI > 0.7854),genetic differentiation(Fst = 0.0844)and strong gene
flow(Nm = 2.7125). Five populations showed inbreeding and deviated from Hardy-Weinberg Equilibrium
at most loci. Based on these results,the possible formation of the high level genetic diversity and the low
genetic differentiation were discussed , and further strategies and suggestions for utilization and
conservation of these resources were also proposed.

Key words: wild Chinese cherry, Prunus pseudocerasus, SSR, genetic diversity, genetic structure

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