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园艺学报 ›› 2007, Vol. 34 ›› Issue (1): 117-124.

• 蔬菜 • 上一篇    下一篇

白菜多聚半乳糖醛酸酶基因B cM F6的克隆、序列分析及其表达

张 强; 黄 鹂; 曹家树*
  

  1. (浙江大学蔬菜研究所, 杭州310029)
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2007-02-25 发布日期:2007-02-25

Cloning, Characterization and Expression of a Polygalacturonase GeneBcMF6 from Chinese Cabbage-pak-choi( Brassica campestris L. ssp. chinensis Makino)

ZHANG Qiang; HUANG Li; CAO J ia-shu*   

  1. (Laboratory of Cell & Molecular Biology, Institute of Vegetable Science, Zhejiang University, Hangzhou 310029,China)
  • Received:1900-01-01 Revised:1900-01-01 Online:2007-02-25 Published:2007-02-25

摘要: 从白菜(Brassica campestris L. ssp. chinensis Makino) 核隐性不育两用系‘Bajh97201A /B’可
育株中分离得到的一个cDNA-AFLP差异片段入手, 利用RACE技术成功克隆了一个花粉特异的多聚半乳糖
醛酸酶( PG) 基因BcMF6的DNA和cDNA全长序列, 并对其序列进行了分析。结果表明, 该基因包含4
个外显子和3个内含子, 最大开放阅读框为1 194 bp, 编码397个氨基酸序列, 对推导的氨基酸序列进行
分析, 1到22个氨基酸是1信号肽序列, 其后有4个平行β螺旋重复( PbH1) 结构, 该序列包含3个N -
糖基化位点, 4个蛋白激酶c磷酸化位点, 5个酪蛋白激酶Ⅱ磷酸化位点, 10个N - 豆蔻酰化位点, 1个
PG活性位点(227RVTCGPGHGIS1 IGS240 ) 等。将B cM F6基因氨基酸序列与数据库中的其他PGs基因进行同
源序列比对, 构建系统进化树, 发现该基因具有所有PGs基因特有的4个保守结构域, 并且与花粉中特异
表达的PG基因聚为一类, 表明该基因是与花粉发育相关的多聚半乳糖醛酸酶基因。RT-PCR对其表达的研
究表明, 该基因在可育株(野生型) 的中大蕾、开放花和短角果中特异表达, 进一步表明该多聚半乳糖醛
酸酶基因与白菜的花粉发育相关。

关键词: 白菜, BcMF6, 花粉发育, 多聚半乳糖醛酸酶, 克隆

Abstract: On the basis of one cDNA-AFLP differential fragment isolated from the fertile Bline of
Chinese cabbage-pak-choi (Brassica campestris L. ssp. chinensis Makino) nuclear recessive sterile A /B line
(Bajh97201A /B) , the full length DNA and cDNA of BcMF6 gene encoding pollen2specific polygalacturonase
were cloned by rapid amplification of cDNA ends (RACE). The gene consisted of 1 194 bp encoding a
protein of 397 amino acids and was interrup ted by three introns of 81 bp, 95 bp and 127 bp in length.
Sequence analysis revealed that it has three N-glycosylation sites, four protein kinase Cphosphorylation site,
five casein kinaseⅡphosphorylation site, ten N-myristoylation sites and one polygalacturonase active position
(227RVTCGPGHGIS1 IGS240 ). And the first 22 amino acids of the predicted BcMF6 protein form a N-terminal
hydrophobic domain which disp layed the p roperties of a signal peptide and four parallel beta-helix repeats
followed behind. Four domains which were highly conserved in all p lant and fungal PGs was p resent in
BcMF6. Phylogenetic analysis showed that BcMF6 falls into the category of clade2C, which included PG
related to pollen. These results showed that BcMF6 acts as pollen-specific polygalacturonase. Furthermore,
the exp ression using RT-PCR discovered that BcMF6 was exclusively exp ressed in middle and big flower bud,opened flower and slow pod of fertile line (wild type) , which showed BcMF6 closely related with the develop
ment of flower.

Key words: Chinese cabbage-pak-choi, Brassica campestris ssp. chinensis, BcMF6, Pollen, Polygalacturonase, Clone